The DOHC ones are even worse. Can me made to work ok with different needles commonly available in the K&N jet kit. Air box makes the stock carbs work fine.
Best thing to run with pods is a completely different bank of carbs...Pull slides:
http://www.sudco.com/mikuni.htmlhttp://www.dynoman.net/carb/keiCR.htmlSome of these can be sourced used from other bikes too...Some KZ's, early GXSR's, etc.