Dude,you got so lucky that trick worked! Carb cleaner makes rubber stuff swell cause it is actually sort of dissolving it. The swelling wont hurt anything (like you said, it makes the seal tighter actually) but the rubber can become too soft afterwards and start crumbling. You carbs were not exposed to it for a super long period of time,so i wouldnt let it worry you too much. Worst that can happen is your bowl gaskets or the o-rings on the tee fittings can start to leak. Both are super easy and cheap to fix with the carbs still on the bike. No big deal really except carb bowl gaskets run about $15-20 for set + shipping.
The only real problem with what you did is that it could have flushed the dirt out of the needle seat into an internal passage causing to HAVE to pull the carbs and deep clean them. Also,if your bike has plastic floats (some are brass) the carb cleaner can dissolve some of them in a matter of seconds depending on what material they are made of.
But oh well, it's running good now so: problem fixed!